SubtiBank SubtiBank
ypmT [2017-8-11 16:0:3]
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ypmT [2017-8-11 16:0:3]

unknown
locus
BSU21720
pI
8.81
mw
7.59 kDa
protein length
gene length
192 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    2,290,078 → 2,290,272

    The protein

    Protein family

  • type-I 3-dehydroquinase family (according to Swiss-Prot)
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operons

    genes
    [gene|0337C7B1CFA1C59710A7E6463A370F8C39AAC8EA|sco]-[gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
    description
    (according to [http://dbtbs.hgc.jp/COG/prom/ypmT.html DBTBS]) null

    additional information

  • the terminator is [protein|search|NusA]-dependent [ http://www.nature.com/articles/nmicrobiol20157 Reference]
  • view in new tab

    genes
    [gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B272 (ypmT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1271 NBRP B. subtilis, Japan]